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Cloning and Expression Analysis of Glyceraldehyde-3-phosphate Dehydrogenase From Ziziphus jujuba(PDF)

《北方园艺》[ISSN:1001-0009/CN:23-1247/S]

Issue:
2015年13
Page:
102-106
Research Field:
Publishing date:

Info

Title:
Cloning and Expression Analysis of Glyceraldehyde-3-phosphate Dehydrogenase From Ziziphus jujuba
Author(s):
BU Jiaodi1CHEN Yingying2LIU Mengjun2ZHAO Jin1
1.College of Life Science,Agricultural University of Hebei,Baoding,Hebei 071000;2.Research Center of Chinese Jujube,Agricultural University of Hebei,Baoding,Hebei 071000
Keywords:
Ziziphus jujubaglyceraldehyde-3-phosphate dehyrogenasecloningexpression analysis
PACS:
Q 786;S 665
DOI:
10.11937/bfyy.201513030
Abstract:
Taking Ziziphus jujube Mill.‘Jinsixiaozao’as material,a fulllength cDNA sequence of GAPDH gene was cloned from Chinese jujube by homologous gene cloning method and RT-PCR method.The results showed that,the gene was 1 020 bp,the estimated molecular weight and isoelectric point of the putative protein were 36-904 kDa and 8.53,named as ZjGAPDH (accession number KP147910).The protein had two conserved domains named as Gp_dh_N superfamily and Gp_dh_C superfamily.Phylogenic analysis showed that ZjGAPDH had a low homology with that of other species but all belong to cytoplasmic proteins and involve in glycolysis.Qrt-PCR analysis showed that the ZjGAPDH expressions at different riping stages of jujube fruit were significantly different,and the expression level of ZjGAPDH at young fruit stage and whole-red ripening stage were higher than that of other stages.

References:

[1]Martin W,Brinkmann H,Savonna C,et al.Evidence for a chimeric nature of nuclear genomes:Eubacterial origin of eukaryotic glyceraldehydes-3-phosphate dehydrogenase genes[J].PNAS,1993,90:8692-8696.[2]王幼宁,刘孟雨,李霞.植物3-磷酸甘油醛脱氢酶的多维本质[J].西北植物学报,2005,25(3):607-614.[3]Hajirezaei M R,Biemelt S,Peisker M,et al.The influence of cytosolic phosphory lating glyceraldehyde-3-phosphate dehydrogenase (GAPC) on potato tuberm etabolism[J].Journal of Experimental Botany,2006,57(10):2363-2377.[4]刘志华,杨谦.球毛壳菌甘油醛-3-磷酸脱氢酶基因克隆及特性分析[J].微生物学报,2005,45(6):885-889.[5]Zhang X H,Rao X L,Shi H T,et al.Over expression of a cytosolic glyceraldehydes-3-phosphate dehydrogenase gene OsGAPC3 confers salt tolerance in rice[J].Plant Cell Tissue Organ Culture,2011,107(1):1-11.[6]Kubo H.Cloning and expression analysis of putative glyceraldehydes-3-phosphate dehydrogenase genes in Pilobolus crystallinus[J].Mycoscience,2011,52(2):99-106.[7]岳彩凤,康国章,刘超,等.小麦GAPDH基因克隆及序列分析[J].中国农学通报,2008,24(4):94-98.[8]杨洋,张智俊,罗淑萍.毛竹甘油醛-3-磷酸脱氢酶基因的克隆与序列分析[J].经济林研究,2010,28(3):7-13.[9]朱华,李坤,赵瑞强,等.三七植物GAPDH基因克隆及序列分析[J].西北植物学报,2006,26(7):1316-1319.[10]赵锦,代丽,薛陈心,等.离体条件下进行治疗枣疯病药物筛选的可行性研究[J].河北农业大学学报,2006,29(1):70-73.[11]刘中成.枣的总RNA提取及mRNA差异显示技术体系的建立[D].保定:河北农业大学,2005.[12]张传义,孟玉平,孙海峰,等.苹果AFL1基因原核表达载体的构建及其在大肠杆菌中的表达[J].山西农业科学,2008,36(7):14-16.[13]Sun H F,Meng Y P,Cui G M,et al.Selection of housekeeping genes for gene expression studies on the development of fruit bearing shoots in Chinese jujube (Ziziphus jujuba Mill.) [J].Molecular Biology Reports,2009 36,2183-2190.[14]Live K J,Schmittgen T D.Analysis of relative gene expression data using real-time quantitative PCR and the 2 -△△Ct method[J].Methods,2011,25:402-408.[15]Mukherjee S,Dutta D,Saha B,et al.Crystal structure of glyceraldehydes-3-phosphate dehydrogenase 1 from methicillin resistant Staphylococcus aureus MRSA252 provides novel insights into substrate binding and catalytic mechanism [J].Journal of Molecular Biology,2010,401(5):949-968.[16]Robien M A,Bosch J,Buckner F S,et al.Crystal structure of glyceraldehydes-3-phosphate dehydrogenase from Plasmodium falciparum at 2.25 resolution reveals intriguing extra electron density in the active site[J].Proteins:Structure,Function,Bioinformatics,2006,62(3):570-577.[17]Frayne J,Taylor A,Cameron G,et al.Structure of insoluble rat sperm glyceraldehydes-3-phosphate dehydrogenase (GAPDH) via heterotetramer formation with Escherichia coli GAPDH reveals target for contraceptive design [J].Journal of Biological Chemistry,2009,284(34):22703-2712.[18]Kundu S,Roy D.Computational study of glyceraldehydes-3-phosphate dehydrogenase of Entamoeba histolytica:Implications for structure based drug design[J].Journal of Biomolecular Structure and Dynamics,2007,25(1):25-33.[19]罗聪,何新华,胡颖,等.杧果MGAPDH同源基因的克隆及其表达分析[J].果树学报,2011,28(6):1019-1024.[20]余汇,蒋向军,覃宇燕,等.罗汉果GAPDH基因的克隆及其在基因表达分析中的应用[J].时珍国医国药,2014,25(2):495-498.[21]孙蓉,高静雷,刘珊,等.金龙胆草3磷酸甘油醛脱氢酶基因的克隆及序列分析[J].中草药,2013,44(19):2732-2735.

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Last Update: 2015-08-21