LI Jinqi,ZHOU Xiaohui,WEI Jie,et al.Genetic Relationship Analysis of Lespedeza Based on ISSR Molecular Markers[J].Northern Horticulture,2023,(18):62-69.[doi:10.11937/bfyy.20230605]
基于ISSR分子标记的胡枝子属亲缘关系研究
- Title:
- Genetic Relationship Analysis of Lespedeza Based on ISSR Molecular Markers
- 文章编号:
- 1001-0009(2023)18-0062-08
- Keywords:
- Lespedeza; ISSR; genetic relationships; genetic diversity
- 分类号:
- S 685.99
- 文献标志码:
- A
- 摘要:
- 以29份胡枝子属植物叶片为试材,采用简单序列重复区间(inter-simple sequence repeat,ISSR)分子标记技术进行试验,并构建指纹图谱,研究了29份胡枝子属植物材料间的亲缘关系及遗传多样性,以期为华北地区胡枝子属植物的引种和育种工作提供参考依据。结果表明:共筛选出10条多态性ISSR引物,利用多态性ISSR引物进行PCR扩增,共扩增出93条谱带,其中多态性条带92条,多态性比例(PPB)为98.92%,并选取引物UBC-812构建指纹图谱。平均有效基因数为1.477 5,平均Nei′s遗传多样性指数(H)为0.293 3。通过UPGMA聚类分析,在遗传相似性系数为061时,可将29份材料分为3个类群,与传统分类并不完全一致。综上可知,胡枝子属植物遗传多样性较高,二色胡枝子实生筛选品种并未完全聚在一起,说明通过杂交育种等方法培育的二色胡枝子的遗传多样性得到显著提高。
- Abstract:
- The genetic diversity and genetic relationship of 29 plant materials of Lespedeza were studied by inter simple sequence repeat(ISSR) molecular marker technology,and fingerprints were constructed,in order to provide reference for the introduction and breeding of Lespedeza in North China.The results showed that a total of 10 polymorphic ISSR primers were screened,PCR amplification was performed by polymorphic ISSR primers,and a total of 93 bands were amplified,included 92 polymorphic bands,and the polymorphism ratio (PPB) was 98.92%,and primer UBC-812 was selected to construct a fingerprint.The average effective gene number was 1.477 5 and the average Nei′s genetic diversity index (H) was 0.293 3.Through UPGMA cluster analysis,when the genetic similarity coefficient was 0.61,the 29 materials could be divided into 3 groups,which was not completely consistent with the traditional classification.In conclusion,the genetic diversity of Lespedeza was high,and the selected varieties of Lespedeza bicolor were not completely clustered,indicated that the genetic diversity of Lespedeza bicolor cultivated by cross breeding and other methods had been significantly improved.
参考文献/References:
[1]马彦军,曹致中,李毅.胡枝子属植物研究进展[J].草业科学,2010,27(10):128-134.[2]SCHINDLER A K.Einige bemerkungen uber Lespedeza Michx.Undihre nachsten verwandten[J].Engler.Bot.Jahrb,1913,49:570-658.[3]中国植物志编写委员会.中国植物志(四十一卷)[M].北京:中国科学出版社,1999.[4]NYBOM H,WEISING K,BJORN R.DNA figerprinting in botany:Past,present,future[J].InvestiGative Genrtics,2014,5(1):1[5]GODWIN I D,AITKEN E A,SMITH L W.Application of inter simple sequence repeat (ISSR) markers to plant genetics.[J].Electrophoresis,1997,18(9):1524-1528.[6]XIAO P,LIU H,WANG D P.Assessment of genetic diversity in Camellia oleifera Abel.accessions using intersimple sequence repeat (ISSR) and start codon targeted (SCoT) polymorphic markers[J].Genetic Resources and Crop Evolution,2020,67:1115-1124.[7]巨秀婷,阿啟兰,侯志强.基于ISSR分子标记的郁金香品种遗传多样性分析[J].基因组学与应用生物学,2017,36(7):2934-2939.[8]VARGAS J E E,AGUIRRE N C,YACENIA M C.Study of the genetic diversity of tomato (Solanum spp.) with ISSR markers[J].Revista CERES,2020,67(3):199-206.[9]XU B,GAO X F,WU N,et al.Pollen diversity and its systematic implications in Lespedeza (Fabaceae)[J].Systematic Botany,2011,36(2):352-361.[10]田宏,王志勇,张鹤山.胡枝子属植物花叶器官形态结构研究[J].西南农业学报,2020,33(10):2357-2363.[11]ZHANG J Y,YUAN Q H,MENG Y Q.A genetic diversity analysis of wild Lespedeza populations based on morphological characters,allozyme and RAPD methods[J].Plant Breeding,2007,126(1):89-94.[12]FANT J B,BANAI A,HAVENS K.Hybridization between the threatened plant,Lespedeza leptostachya Englem.and its cooccurring congener Lespedeza capitata Michx.:Morphological and molecular evidence[J].Conservation Genetics,2010,11(6):2195-2205.[13]潘平新,马瑞,马彦军.甘肃省胡枝子属植物的遗传多样性分析[J].草原与草坪,2021,41(3):26-31,40.[14]红霞.内蒙古胡枝子属( Lespedeza Michx.)植物的分类学研究[D].呼和浩特:内蒙古师范大学,2003.[15]张吉宇.胡枝子属14个野生居群遗传多样性研究[D].兰州:甘肃农业大学,2003.[16]闫伟红.胡枝子属植物野生种质资源遗传多样性研究[D].北京:中国农业科学院,2007.[17]WANG M L,MOSJIDIS J A,MORRIS J B.Evaluation of Lespedeza germplasm genetic diversity and its phylogenetic relationship with the genus Kummerowia[J].Conservation Genetics,2009,10(1):79-85.[18]VENKATESAN J,RAMU V,SETHURAMAN T.Molecular marker for characterization of traditional and hybrid derivatives of Eleusine coracana (L.) using ISSR marker[J].Journal of Genetic Engineering and Biotechnology,2021,19(1):178.[19]CHENG J X,HY D Y,LIU Y R.Molecular identification and genetic relationships among Alcea (Malvaceae) species by ISSR Markers:A high value medicinal plant[J].Caryologia,2021,74(3):65-75.[20]KESHAVARZI M,TABARIPOUR R.Genetic diversity of Lolium persicum (Poaceae) in Southern Region of coastal caspian sea using ISSR Markers[J].Iranian Journal of Science and Technology,Transactions A:Science,2021,45(6):1-8.[21]赵杨,陈晓阳,王秀荣9种胡枝子亲缘关系的ISSR分析[J].吉林林业科技,2006(2):1-4.[22]杨静芳.山西不同居群达乌里胡枝子的遗传多样性分析[D].晋中:山西农业大学,2013.[23]赵杨.二色胡枝子遗传多样性及胡枝子属种间亲缘关系研究[D].北京:北京林业大学,2006.[24]骈瑞琪.胡枝子传粉生物学及分子标记应用的研究[D].北京:北京林业大学,2009.[25]WANG S T,MENG F,WU J.The complete chloroplast genome sequence of Lespedeza buergeri Miq.(Fabaceae)[J].Mitochondrial DNA.Part B,Resources,2022,7(7):1249-1251.[26]阎伟红,师文贵,徐柱.胡枝子属植物野生种质资源及其研究进展[J].中国草地学报,2007(2):86-93.
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备注/Memo
第一作者简介:李谨圻(1996-),女,硕士研究生,研究方向为园林栽培与应用。E-mail:jinli99662023@163.com.责任作者:史宝胜(1969-),男,博士,教授,博士生导师,现主要从事园林栽培与应用等研究工作。E-mail:baoshengshi@163.com.基金项目:河北省重点研发资助项目(21326349D)。收稿日期:2023-02-28