SHAO Qian-shun,GAO Lei,NAN Xiong-xiong,et al.Analysis of Genetic Diversity and Construction of Fingerprint of Lycium bararum L.Using SSR Technology[J].Northern Horticulture,2015,39(12):91-95.[doi:10.11937/bfyy.201512024]
利用SSR技术对十七份枸杞材料进行遗传多样性分析及标准指纹图谱构建
- Title:
- Analysis of Genetic Diversity and Construction of Fingerprint of Lycium bararum L.Using SSR Technology
- 文章编号:
- 1001-0009(2015)12-0091-05
- Keywords:
- Lycium bararum L.; SSR; genetic diversity; fingerprint map
- 分类号:
- S 567.1+9
- 文献标志码:
- A
- 摘要:
- 以17个枸杞资源为试材,采用简单重复序列(Simple Sequence Repeat,SSR)技术,研究宁夏枸杞系列品种和其它枸杞种/品种及野生类型的遗传多样性和指纹图谱。结果表明:以15对SSR引物对17份枸杞种质扩增获得109个位点,其中91个多态性位点,多态性比例83.4%;17个种质平均多样性指数H为0.1943,Shannon信息指数I为0.3108;10个宁夏枸杞栽培品种的Nei’s多样性指数H为0.0962,Shannon信息指数I为0.1537;7个野生种质的Nei’ s多样性指数H为0.2004,Shannon信息指数I为0.3130,说明非栽培枸杞的多样性比栽培品种的多样性更丰富。以其中4对引物构建了17个枸杞种质的DNA指纹图谱。该研究结果为枸杞品种鉴定、遗传图谱构建等奠定了技术基础。
- Abstract:
- Genetic diversity of Ningxia wolfberry series varieties and other Chinese wolfberry species/varieties and wild type were analyzed using Simple Repeat sequences (SSR) technology with 17 wolfberry germplasm,also their fingerprint map was constructed for the first time.The results showed that 17 Chinese wolfberry germplasm was checked with 15 pairs of SSR primers,and 91 polymorphic loci of 109 loci were obtained,the proportion of polymorphism was 83.4%;the average diversity index H of 17 germplasm was 0.1943,the Shannon information index I was 0.3108;the Nei ‘ s diversity index H of 10 ningxia wolfberry cultivars was 0.0962,the Shannon information index I was 0.1537;the Nei ’s diversity index H of 7 wild germplasm was 0.2004,Shannon information index I was 0.3130.It’s proved that the diversity of the not cultivated wolfberry was richer than that of cultivated varieties.The fingerprint map of 17 Chinese wolfberry germplasm was constructed with four pairs of primers.Our study laid a solid foundation for the identification of Chinese wolfberry species and the construction of genetic map.
参考文献/References:
[1]路安民.中国枸杞属的分类[M].银川:宁夏人民出版社,1999.[2]钟笙元.枸杞高产栽培技术[M].北京:金盾出版社,2005.[3]秦国峰.枸杞是我国重要的经济植物资源[M].银川:宁夏人民出版社,1982.[4]袁海静,安巍,李立会,等.中国枸杞种质资源主要形态学性状调查与聚类分析[J].植物遗传资源学报,2013,14(4):627-633.[5]尚洁,李收,张靠稳.宁夏枸杞遗传多样性的 RAPD 分析[J].植物研究,2010(1):116-119.[6]Zhang Y B,Leung H W,Yeung H W,et al.Differentiation of Lycium barbarum from its related Lycium species using random amplified polymorphic DNA[J].Planta Medica,2001,67(4):379-381.[7]严奉坤,许兴,魏玉清,等.枸杞基因组 DNA 提取及指纹图谱分析[J].时珍国医国药,2007,18(1):46-48.[8]严奉,坤许兴,杨亚亚,等.同一品种不同产地宁夏枸杞 DNA 指纹图谱特征研究[J].时珍国医国药,2007,18(10):2385-2386.[9]王娅丽,王锦秀,常红宇.鲜食枸杞新品种‘宁杞6号’[J].园艺学报,2011,38(5):1015-1016.[10]李健,王锦秀.无籽枸杞新品种选育研究[J].西北植物学报,2001,21(3);446-450.[11]Zhang Z S,Xiao Y H,Luo M,et al.Construction of a genetic linkage map and QTL analysis of fiber related traits in upland cotton (Gossypium hirsutum L.)[J].Euphytica,2005,144:91-99.[12]曹永生,孔繁胜,王宇生.基于图象处理的种质资源指纹图谱分析[EB/OL].中国作物种质信息网.http://icgr.caas.net.cn/training/forum/,基于图象处理的种质资源指纹图谱分析.html.[13]丁艳来,赵团结,盖钧镒.中国野生大豆的遗传多样性和生态特异性分析[J].生物多样性,2008,16(2):133-142.[14]李瑞芬,李聪.沙打旺种质资源遗传多样性RAPD分析[J].草地学报,2001,9(3):171-175.[15]河北枸杞主产地巨鹿县[EB/OL].产地网.http://www.chandi.cn/chandi/detail/37.html.[16]高捍东,黄宝龙.板栗主要栽培品种的分子鉴别[J].林业科学,2001,37(1):64-71.[17]缪恒彬,陈发棣,赵宏波,等.应用ISSR对25个小菊品种进行遗传多样性分析及指纹图谱构建[J].中国农业科学,2008(11):3735-3740.[18]雷天刚,何永睿,吴鑫,等.柑橘栽培品种(系)DNA 指纹图谱库的构建[J].中国农业科学,2009,42(8):2852-2861.[19]潘兆娥,王希文,孙君灵,等.中棉所48的SSR数字指纹图谱的构建[J].中国农学通报,2010(7):3135.[20]李丽华,魏昕,潘光堂.20 个骨干玉米自交系的 SSR 指纹图谱构建[J].西南农业学报,2008,20(6):1172-1175.[21]徐宗大,赵兰勇,张玲,等.玫瑰 SRAP 遗传多样性分析与品种指纹图谱构建[J].中国农业科学,2011,44(8):1662-1669.[22]关强,张月学,徐香玲,等.DNA分子标记的研究进展及几种新型分子标记技术[J].黑龙江农业科学,2008(1):102-104.[23]魏玉清,许兴,王璞.不同地区主要栽培宁夏枸杞品种的RAPD分析[J].西北农林科技大学学报(自然科学版),2007(1):91-95.[24]Littm L.A hypervariable microsatellite revealed by in vitro amplification of dinucleotide repeats within the cardiac muscleact in gene[J].Am J H um Gene,1998,44:397-401.[25]郝晨阳,王兰芬,张学勇,等.SSR 荧光标记和银染技术的比较分析[J].作物学报,2005,31(2):144-149.[26]李晓辉,李新海,张世煌,等.玉米杂交种DNA 指纹图谱及其在亲子鉴定中的应用[J].作物学报,2005(3):1-8.
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备注/Memo
第一作者简介: 邵千顺(1986-),硕士,助理研究员,研究方向为分子遗传育种。Email:shaoqianshun@126.com.基金项目: 农业科技成果转化资金资助项目(2012GB300478)。