CAO Xiaoshuang,YANG Anni,LAN Hongyuan,et al.Genome-wide Identification and Bioinformatics Analysis of the AcREMORIN Gene Family in Onion[J].Northern Horticulture,2025,(19):1-7.[doi:10.11937/bfyy.20250906]
洋葱AcREMORIN基因家族的全基因组鉴定及生物信息学分析
- Title:
- Genome-wide Identification and Bioinformatics Analysis of the AcREMORIN Gene Family in Onion
- 文章编号:
- 1001-0009(2025)19-0001-07
- 关键词:
- 洋葱; REMORIN基因家族; 生物信息学
- Keywords:
- onion; REMORIN gene family; bioinformatics
- 分类号:
- S 633.2
- 文献标志码:
- A
- 摘要:
- 以洋葱 (Allium cepa) 全基因组数据为试材,采用生物信息学方法,研究了AcREMORIN基因家族成员的鉴定、系统进化、结构特征及其启动子调控元件,以期解析该基因家族在洋葱中的生物学功能,并为深入探究其分子机制提供参考依据。结果表明:共鉴定出6个AcREMORIN成员;4个成员定位于细胞膜,2个成员同时定位于细胞膜与细胞核,所有成员均含有保守的Remorin_C结构域;系统进化分析将洋葱与其他植物REMORIN基因划分为6个分支;启动子顺式作用元件分析揭示AcREMORIN基因参与激素信号转导并能响应环境胁迫。
- Abstract:
- Taking the whole genome data of onion (Allium cepa) as the test material,members of the AcREMORIN gene family were identified and analyzed through bioinformatics approaches,focusing on their phylogenetic evolution,structural characteristics,and promoter regulatory elements,in order to elucidate the biological functions of this gene family in onion and provide reference for investigating its molecular mechanisms.The results showed that six AcREMORIN members.Four members were localized to the cell membrane,while two exhibited dual localization to both the cell membrane and nucleus.All members contained the conserved Remorin_C domain.Phylogenetic analysis classified the REMORIN genes from onion and other plants into six distinct clades.Analysis of promoter cis-acting elements indicated that AcREMORIN genes participate in hormonal signaling transduction and could respond to environmental stresses.
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备注/Memo
第一作者简介:曹孝双(1999-),男,硕士研究生,研究方向为植物发育生物学。E-mail:1480907032@qq.com.责任作者:徐启江(1969-),男,博士,教授,现主要从事植物发育生物学等研究工作。E-mail:qijiangxu@126.com.基金项目:中央高校基本科研业务费专项资金资助项目(2572020DY07);广西自然科学基金项目面上资助项目(2023GXNSFAA026289)。收稿日期:2025-03-12