LIU Yanpu,XIAO Xue,ZHAO Jianming,et al.Bioinformatics and Expression Analysis of VyCIPK3Gene in Chinese Wild Grape Vitis yeshanesis cv.‘Yanshan’ Grape[J].Northern Horticulture,2023,(15):33-40.[doi:10.11937/bfyy.20224004]
中国野生‘燕山’葡萄VyCIPK3基因生物信息学与表达分析
- Title:
- Bioinformatics and Expression Analysis of VyCIPK3Gene in Chinese Wild Grape Vitis yeshanesis cv.‘Yanshan’ Grape
- Keywords:
- ‘Yanshan’ grape; VyCIPK3gene; plant growth regulators; abiotic stress; expression analysis
- 文献标志码:
- A
- 摘要:
- 以中国野生‘燕山’葡萄(Vitis yeshanensis ‘Yanshan’)为试材,克隆VyCIPK3基因,GenBank登录号为NM_001281283,利用实时定量PCR(qPCR)技术分析了VyCIPK3基因在葡萄不同组织器官中,以及不同植物生长调节剂、非生物胁迫诱导下葡萄中的基因表达,以期为进一步研究葡萄CIPK基因的分子功能及探讨葡萄抗逆分子机制提供参考依据。结果表明:VyCIPK3基因表达具有组织特异性,在根中高表达;VyCIPK3基因对脱落酸(ABA)和茉莉酸甲酯(MeJA)诱导响应强烈,VyCIPK3基因在不同逆境胁迫中,对盐胁迫响应更为强烈。VyCIPK3基因在‘燕山’葡萄生长发育和抵御外界逆境胁迫方面起着重要的作用,该研究有助于了解中国野生葡萄的抗逆机制,为葡萄抗逆育种提供基因资源。
- Abstract:
- Taking Chinese wild ‘Yanshan’ grape (Vitis yeshanensis ‘Yanshan’) as the material,we cloned the VyCIPK3 gene,with GenBank accession number NM_001281283,and analyzed the gene expression of the VyCIPK3 gene in different tissues and organs of grapes,as well as in grapes under the induced by different plant growth regulators and abiotic stresses by using quantitative realtime PCR (qPCR),in order to provide reference for the further study on the molecular function of the CIPK gene in grapes and the exploration of molecular mechanisms of grapevine stress resistance.The results showed thatVyCIPK3gene expression was tissue specific and highly expressed in roots.TheVyCIPK3gene responded strongly to abscisic acid (ABA) and methyl jasmonate (MeJA) induction,and theVyCIPK3gene responded more strongly to salt stress among different adversity stresses.TheVyCIPK3gene played an important role in ‘Yanshan’ grape growth and development and protection against external adversity stress,and this study might help to understand the mechanism of stress resistance in wild grapes in China and provide a gene resource for grape stress resistance breeding.
参考文献/References:
[1]张永福,徐仕琴,陈姣,等.葡萄耐铝毒基因STOP1的克隆与表达分析[J].西南农业学报,2022,35(3):588-595.[2]CHONG J,LE H G,BERTSCH C,et al.Identification,expression analysis and characterization of defense and signaling genes in Vitis vinifera[J].Plant Physiology Biochemistry,2008,46(4):469-481.[3]LI G R,XU W W,JING P W,et al.Overexpression ofVyDOF8,a Chinese wild grapevine transcription factor gene,enhances drought tolerance in transgenic tobacco[J].Environmental and Experimental Botany,2021,190(1):104592.[4]YU Y H,XIA X L,YIN W L,et al.Comparative genomic analysis of CIPK gene family in Arabidopsis and populous[J].Plant Growth Regulation,2007,52(2):101-110.[5]NER K,STEFAN W,DRAGICA B,et al.Calcium sensors and their interacting protein kinases:Genomics of the Arabidopsis and rice cbl-cipk signaling networks[J].Plant Physiology,2004,134(1):43-58.[6]MARTIN Z.Enbe men karmo suryoyo (bunches of grapes from the syriac vineyard):A syriac chrestomathy[M].Piscataway:Gorgias Press,2010.[7]LI G R,QUAN R,CHENG S S,et al.Cloning and activity analysis of grape VvCIPK10 promote[J].International Journal of Agriculture & Biology,2020(24):299-303.[8]XIANG Y,HUANG Y M,XIONG L Z.Characterization of stressresponsive CIPK genes in rice for stress tolerance improvement[J].Plant Physiology,2007,144(3):1416-1428.[9]WANG L Y,WANG Y,MENG X,et al.Overexpression of tomato GDP-l-galactose phosphorylase gene enhanced tolerance of transgenic tobacco to methyl viologen mediated oxidative stress[J].Plant Physiology Journal,2012,48(7):689-698.[10]MA X,LI Q H,YU Y N,et al.The CBL-CIPK pathway in plant response to stress signals[J].International Journal of Molecular Sciences,2020,21(16):5668.[11]TAI F J,WANG Q,YUAN Z L,et al.Characterization of five CIPK genes expressions in maize under water stress[J].Acta Physiologiae Plantarum,2013,35(5):1555-1564.[12]SUN W N,ZHANG B,DENG J W,et al.GenomEwide analysis of CBL and CIPK family genes in cotton:Conserved structures with divergent interactions and expression[J].Physiology and Molecular Biology of Plants,2021,27(2):359-368.[13]XI Y,LIU J Y,DONG C,et al.The CBL and CIPK gene family in grapevine (Vitis vinifera ):GenomEwide analysis and expression profiles in response to various abiotic stresses[J].Frontiers in Plant Science,2017(8):978.[14]高敏,SAXENA K P,刘春朝.植物代谢组学研究进展(英文)[J].西北植物学报,2005(2):405-412.[15]LIVAK K J,SCHMITTGEN T D.Analysis of relative gene expression data using realtime quantitative PCR and the 2-ΔΔCT method[J].Methods,2001,25(4):402-408.[16]董连红.林烟草CBL基因家族成员NsylCBL10的功能分析[D].北京:中国农业科学院,2015.[17]余义和,李秀珍,郭大龙,等.葡萄类钙调磷酸酶B亚基互作蛋白激酶VvCIPK10的特性与表达[J].中国农业科学,2016,49(19):3798-3806.[18]闫朝辉,李桂荣,扈岩松,等.欧洲葡萄中CIPK基因的克隆及表达分析[J].园艺学报,2017,44(8):1463-1476.[19]路志浩,霍建强,马钰,等.葡萄CIPK基因家族的鉴定表达分析[J].西北农业学报,2017,26(11):1619-1630.[20]陈析丰,顾志敏,刘峰,等.生物与非生物胁迫下水稻CIPK基因的鉴定分析[J].中国水稻科学,2010,24(6):567-574.[21]闫亚飞.烟草NtCIPK23基因的克隆、表达分析及转基因过量表达研究[D].重庆:重庆大学,2012.[22]袁志恒,申腾飞,王琦,等.玉米CIPK3蛋白激酶的克隆及表达分析[J].河南农业大学学报,2012,46(4):359-363,369.[23]陈勋基,陈果,邵琳,等.玉米ZmCIPK42克隆及逆境胁迫后表达特异性分析[J].分子植物育种,2013,11(3):326-331.[24]凌秋平,曾巧英,胡斐,等.甘蔗CIPK23基因克隆及对低钾、干旱、盐胁迫的响应[J].分子植物育种,2015,13(6):1329-1335.[25]WANG J J,LU X K,YIN Z J,et al.GenomEwide identification and expression analysis of CIPK genes in diploid cottons[J].Genetics and Molecular Research,2016,15(4):1-20.
备注/Memo
第一作者简介:刘砚璞(1982-),女,硕士,讲师,现主要从事园艺植物资源评价及设计利用等研究工作。Email:yanpuliu2020@163.com.基金项目:山东省重大科技创新工程资助项目(2019JZZY010727)。收稿日期:2022-10-01