LI Xue-xin,BAI Zhi-chuan,YUE Huan,et al.Bioinformatics Analysis of Orange WRKY Transcription Factor Sequence[J].Northern Horticulture,2013,37(01):119-123.
甜橙WRKY转录因子序列的生物信息学分析
- Title:
- Bioinformatics Analysis of Orange WRKY Transcription Factor Sequence
- 文章编号:
- 1001-0009（2013）01-0119-05
- Keywords:
- Citrus sinensis; WRKY; transcription factor
- 分类号:
- Q 943.2
- 文献标志码:
- A
- 摘要:
- 以拟南芥信息资源网站（TAIR）上公布的拟南芥（Arabidopsis）WRKY蛋白超家族序列为基础，利用BLAST（Basic Local Alignment Search Tool）在甜橙（Citrus sinensis）序列中寻找WRKY蛋白基因。结果表明：共找到53个WRKY蛋白超家族的基因，根据甜橙WRKY蛋白超家族的基因序列特征将其分为3个亚家族：Group I、Group II和Group III，并对有关基因的功能进行了预测，为甜橙WRKY蛋白超家族的基因对外界胁迫以及抗病性机能的研究提供理论依据。
- Abstract:
- Based on the WRKY protein superfamily sequence of Arabidopsis thaliana，BLAST was used to search WRKY superfamily of genes in sweet orange (Citrus sinensis).The results showed that 53 CsWRKY genes were found in sweet orange (Citrus sinensis).These genes were divided into three subfamilies：Group I，Group II and Group III.In addition，the function prediction of genes were made，for providing a theory basis for orange CsWRKY genes to stress and disease resistance.
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备注/Memo
第一作者简介：李学鑫（1985-），男，硕士，研究方向为植物生物学与生物技术。