Identification and Characteristic Analysis of CDPK Gene Family
《北方园艺》[ISSN:1001-0009/CN:23-1247/S]
- Issue:
- 2018年17
- Page:
- 1-6
- Research Field:
- Publishing date:
Info
- Title:
- Identification and Characteristic Analysis of CDPK Gene Family
- Author(s):
- WANG Chaonan; ZHU Qianglong; CUI Haonan; CUI Boming; WANG Xin; LUAN Feishi
- (College of Horticulture and Landspace Architecture,Northeast Agricultural University/Key Laboratory of Biology and Genetic Improvement of Horticulture Crops (Northeast Region),Ministry of Agriculture,Harbin,Heilongjiang 150030)
- Keywords:
- watermelon（Citrullus lanatus）; calcium-dependent protein kinase (CDPK) gene family; genome-wide identification; phylogenetic analysis
- PACS:
- -
- DOI:
- 10.11937/bfyy.20180692
- Abstract:
- CDPK gene family information was used as data source,the bioinformatics was utilized to analyze the CDPK sequence characteristics of gene and amino acid,in order to supply references for researching the CDPK biological function.The results showed that totally 22 CDPK family members were identified in the watermelon and all ClCDPK were divided into 4 groups,which mostly contained 6-7 introns;the amino acid sequence contained 4 EF-hand structures.In the homologous evolution analysis with the model plant Arabidopsis thaliana,phylogenetic tree cluster analysis divided all ClCDPK gene families into four categories.
Last Update: 2018-09-19