|Table of Contents|

Genome-wide Identity and Bioinformatic Analysis of ARF Transcription Factors in Rhododendron delavayi

《北方园艺》[ISSN:1001-0009/CN:23-1247/S]

Issue:
2019年24
Page:
74-80
Research Field:
Publishing date:

Info

Title:
Genome-wide Identity and Bioinformatic Analysis of ARF Transcription Factors in Rhododendron delavayi
Author(s):
ZHANG Wenxiang1; 2; CHEN Tianlan1; ZHANG Rongxiang1; QIAN Changjiang1; LIU Shuwen1; WANG Zibu1; 2
(1.School of Biological Sciences，Guizhou Education University，Guiyang,Guizhou 550018；2.Institute of Medicinal Plant Biotechnology，Guizhou Education University，Guiyang,Guizhou 550018)
Keywords:
Rhododendron delavayi; ARF; bioinformatics analysis
PACS:
-
DOI:
10.11937/bfyy.20191097
Abstract:
Based on the genomic data of Rhododendron delavayi，15 ARF genes were identified by blast comparison program using Arabidopsis ARFs (AtARF) as references，named RdARF.In order to in-depth study or further clone these genes，bio-informatics analysis was carried out to analyze their structures，physio-chemical properties and phylogenetic relationships.The results showed that all the 15 ARF genes of Rhododendron delavayi contained introns and exons，conservative B3 and Auxin-resp domains，serine (Ser.)，threonine (Thr.) and tyrosine (Tyr.) phosphorylation sites，and there were 10 kinds of conserved motifs totally in 15 RdARF proteins，five subgroups (Ia，Ib，IIa，IIb and III) between 15 RdARF and 23 AtARF and 4 different expression patterns response to drought stress.

References:

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Last Update: 2019-12-30