|Table of Contents|

Isolation and Expression Analysis of Cyp450 Genes in Tibet Rhodiola renulata

《北方园艺》[ISSN:1001-0009/CN:23-1247/S]

Issue:
2019年18
Page:
116-127
Research Field:
Publishing date:

Info

Title:
Isolation and Expression Analysis of Cyp450 Genes in Tibet Rhodiola renulata
Author(s):
ZHANG LipengHAN XiangyanCHENG LuluTENG YanjiaoYU DeshuiSONG Wenqin
(College of Life Sciences,Nankai University,Tianjin 300071)
Keywords:
Rhodiola crenulatacyp450bioinformationexpression analysis
PACS:
-
DOI:
10.11937/bfyy.20184635
Abstract:
Using Tibet Rhodiola crenulata as research materials,the cytochrome p450 (cyp450) gene family members were analyzed by bioinformatics and real-time PCR,which would be helpful to obtain preliminary understanding and fill in the research gap for this gene family.The results showed that the open reading frames of 16 Rccyp450 genes were all above 1 374 bp and the length of amino acid sequence were 480-530.Sequence alignment results showed that Rccyp450 genes belonged to 10 subfamilies,of which 4 genes were A type and 12 genes were non-A type.In addition,Rccyp450 genes contained more than 33 phosphate sites which indicated that they might be modified by phosphatases.The expression pattern for tissue and stresses presented that Rccyp450 genes expressed distinctly differently in three tissues and could be induced by low temperature/UA and three hormones included abscisic acid,auxin and jasmonic acid.

References:

[1]贺丽虹,赵淑娟,胡之璧.植物细胞色素P450基因与功能研究进展[J].药物生物技术,2008,15(2):142-147.[2]汪思远,蒋世翠,王康宇,等.植物细胞色素P450的研究进展[J].吉林蔬菜,2014(4):41-45.[3]李翔宇,王助乾,孙春玉,等.植物细胞色素P450 s及其在植物新陈代谢中的作用[J].安徽农业科学,2016,44(13):129-134.[4]NELSON D,WERCKREICHHART D.A P450-centric view of plant evolution[J].Plant Journal,2011,66(1):194-211.[5]WERCKREICHHART D,FEYEREISEN R.Cytochromes P450:A success story[J].Genome Biology,2000,1(6):1-9.[6]CHAPPLE C.Molecular-genetic analysis of plant cytochrome P450-dependent monooxygenases[J].Annual Review of Plant Physiology & Plant Molecular Biology,1998,49(1):311.[7]RUPASINGHE S,SCHULER M A.Homology modeling of plant cytochrome P450s[J].Phytochemistry Reviews,2006,5(2-3):473-505.[8]NELSON D R.Plant cytochrome P450s from moss to poplar[J].Phytochemistry Reviews,2006,5(2-3):193-204.[9]NEBERT D W,ADESNIK M,COON M J,et al.The P450 gene superfamily:Recommended nomenclature[J].Dna,1987,6(1):1.[10]EHLTING J,HAMBERGER B,MILLION-ROUSSEAU R,et al.Cytochromes P450 in phenolic metabolism[J].Phytochemistry Reviews,2006,5(2-3):239-270.[11]RALSTON L,YU O.Metabolons involving plant cytochrome P450s[J].Phytochemistry Reviews,2006,5(2-3):459.[12]HOTZE M,SCHRDER G,SCHRDER J.Cinnamate 4-hydroxylase from Catharanthus roseus and a strategy for the functional expression of plant cytochrome P450 proteins as translational fusions with P450 reductase in Escherichia coli[J].Febs Letters,1995,374(3):345-350.[13]LI R,REED D W,LIU E,et al.Functional genomic analysis of alkaloid biosynthesis in Hyoscyamus niger reveals a cytochrome P450 involved in littorine rearrangement[J].Chemistry & Biology,2006,13(5):513-520.[14]IRMLER S,SCHRDER G,STPIERRE B,et al.Indole alkaloid biosynthesis in Catharanthus roseus:New enzyme activities and identification of cytochrome P450 [STBX]CYP72A1 as secologanin synthase[J].Plant Journal,2010,24(6):797-804.[15]SHIBUYA M,HOSHINO M,KATSUBE Y,et al.Identification of beta-amyrin and sophoradiol 24-hydroxylase by expressed sequence tag mining and functional expression assay[J].Febs Journal,2006,273(5):948-959.[16]SEKI H,OHYAMA K,SAWAI S,et al.Licorice β-Amyrin 11-Oxidase,a cytochrome P450 with a key role in the biosynthesis of the triterpene sweetener glycyrrhizin[J].Proceedings of the National Academy of Sciences of the United States of America,2008,105(37):14204-9.[17]CARELLI M,BIAZZI E,PANARA F,et al.Medicago truncatula CYP716A12 is a multifunctional oxidase involved in the biosynthesis of hemolytic saponins[J].Plant Cell,2011,23(8):3070.[18]MIZUTANI M,TODOROKI Y.ABA 8′-hydroxylase and its chemical inhibitors[J].Phytochemistry Reviews,2006,5(2-3):385-404.[19]TAKEI K,YAMAYA T,SAKAKIBARA H.Arabidopsis [STBX]CYP735A1 and CYP735A2 encode cytokinin hydroxylases that catalyze the biosynthesis of trans-Zeatin[J].Journal of Biological Chemistry,2004,279(40):41866-41872.[20]HELLIWELL C A,SHELDON C C,OLIVE M R,et al.Cloning of the Arabidopsis ent-kaurene oxidase gene GA3[J].Proceedings of the National Academy of Sciences of the United States of America,1998,95(15):9019-9024.[21]HELLIWELL C A,CHANDLER P M,POOLE A,et al.The CYP88A cytochrome P450,ent-kaurenoic acid oxidase,catalyzes three steps of the gibberellin biosynthesis pathway[J].Proc Natl Acad Sci USA,2001,98(4):2065-2070.[22]BOOKER J,SIEBERER T,WRIGHT W,et al.MAX1 encodes a cytochrome P450 family member that acts downstream of MAX3/4 to produce a carotenoid-derived branch-inhibiting hormone[J].Developmental Cell,2005,8(3):443-449.[23]MORRISON A M S,GOLDSTONE J V,LAMB D C,et al.Identification,modeling and ligand affinity of early deuterostome CYP51s,and functional characterization of recombinant zebrafish sterol 14α-demethylase[J].BBA-General Subjects,2014,1840(6):1825-1836.[24]KIM J,DELLAPENNA D.Defining the primary route for lutein synthesis in plants:The role of Arabidopsis carotenoid beta-ring hydroxylase [STBX]CYP97A3[J].Proceedings of the National Academy of Sciences of the United States of America,2006,103(9):3474-3479.[25]JIEUN K,CHENG K M,CRAFT N E,et al.Over-expression of Arabidopsis thaliana carotenoid hydroxylases individually and in combination with a beta-carotene ketolase provides insight into in vivo functions[J].Phytochemistry,2010,71(2):168-178.[26]TIAN L,MUSETTI V,KIM J,et al.The Arabidopsis LUT1 locus encodes a member of the cytochrome p450 family that is required for carotenoid epsilon-ring hydroxylation activity[J].Proceedings of the National Academy of Sciences of the United States of America,2004,101(1):402-407.[27]HOFER R,BOACHON B,RENAULT H,et al.Dual function of the cytochrome P450 [STBX]CYP76 family from Arabidopsis thaliana in the metabolism of monoterpenols and phenylurea herbicides[J].Plant Physiology,2014,166(3):1149.[28]PAN G,ZHANG X,LIU K,et al.Map-based cloning of a novel rice cytochrome P450 gene CYP81A6 that confers resistance to two different classes of herbicides[J].Plant Molecular Biology,2006,61(6):933-943.[29]XIANG W,WANG X,REN T.Expression of a wheat cytochrome P450 monooxygenase cDNA in yeast catalyzes the metabolism of sulfonylurea herbicides[J].Pesticide Biochemistry & Physiology,2006,85(1):1-6.[30]LIU C,LIU S,WANG F,et al.Expression of a rice CYP81A6 gene confers tolerance to bentazon and sulfonylurea herbicides in both Arabidopsis and tobacco[J].Plant Cell Tissue & Organ Culture,2012,109(3):419-428.[31]LAMB S B,LAMB D C,KELLY S L,et al.Cytochrome P450 immobilisation as a route to bioremediation/biocatalysis[J].Febs Letters,1998,431(3):343.[32]NAFISI M,GOREGAOKER S,BOTANGA C,et al.Arabidopsis cytochrome P450 monooxygenase 71A13 catalyzes the conversion of indole-3-acetaldoxime in camalexin synthesis[J].The Plant Cell,2007,19(6):2039-2052.[33]赵风治,王雪莹,王欣蕾,等.花椰菜BoPGIP2基因的克隆与表达水平分析[J].北方园艺,2016(7):77-84.[34]YANG M,ZHANG Y,ZHANG H,et al.Identification of MsHsp20 gene family in Malus sieversii and functional characterization of [STBX]MsHsp16.9 in heat tolerance[J].Front Plant Sci,2017(8):1761.[35]ZHANG L,WU M,YU D,et al.Identification of Glutathione Peroxidase (GPX) gene family in Rhodiola crenulata and gene expression analysis under stress conditions[J].International Journal of Molecular Sciences,2018,19(11):3329.[36]WEI T,DENG K,LIU D,et al.Ectopic expression of DREB transcription factor,ATDREB1A,confers tolerance to drought in transgenic Salvia miltiorrhiza[J].Plant Cell Physiol,2016,57(8):1593-1609.[37]张力鹏,张银兴,宋文芹,等.红景天属植物叶片RNA高效提取的方法[J].南开大学学报(自然科学版),2017(6):48-53.[38]WEI T,DENG K,GAO Y,et al.Arabidopsis DREB1B in transgenic Salvia miltiorrhiza increased tolerance to drought stress without stunting growth[J].Plant Physiol Biochem,2016,104:17-28.[39]WEI T,DENG K,ZHANG Q,et al.Modulating AtDREB1C expression improves drought tolerance in Salvia miltiorrhiza[J].Front Plant Sci,2017,8:52.[40]国家药典委员会.中华人民共和国药典[M].北京:化学工业出版社,2010.[41]ZHANG J Q,MENG S Y,WEN J,et al.DNA barcoding of Rhodiola (Crassulaceae):A case study on a group of recently diversified medicinal plants from the Qinghai-Tibetan Plateau[J].PLoS One,2015,10(3):e0119921.[42]FU Y,LI L,HAO S,et al.Draft genome sequence of the Tibetan medicinal herb Rhodiola crenulata[J].Gigascience,2017(6):1-5.[43]WANG C,YANG Y,WANG H,et al.Ectopic expression of a cytochrome P450 monooxygenase gene PtCYP714A3 from Populus trichocarpa reduces shoot growth and improves tolerance to salt stress in transgenic rice[J].Plant Biotechnol J,2016(14):1838-1851.[44]LIU Z,LIU Y,LIU C,et al.The chemotaxonomic classification of Rhodiola plants and its correlation with morphological characteristics and genetic taxonomy[J].Chemistry Central Journal,2013,7(1):118.[45]WANG Q,RUAN X,JIN Z H,et al.Identification of Rhodiola species by using RP-HPLC[J].J Zhejiang Univ Sci B,2005(6):477-482.[46]JAIN M,CHEN H,WU B,et al.Computational identification and systematic classification of novel cytochrome P450 genes in Salvia miltiorrhiza[J].PLoS One,2014,9(12):e115149.

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Last Update: 2019-10-08