|Table of Contents|

Establishment for SSR Reaction System of Pyrus ussuriensis Maxim and Its Stability Assessment(PDF)

《北方园艺》[ISSN:1001-0009/CN:23-1247/S]

Issue:
2015年23
Page:
104-107
Research Field:
Publishing date:

Info

Title:
Establishment for SSR Reaction System of Pyrus ussuriensis Maxim and Its Stability Assessment
Author(s):
LI HonglianWANG QiangYAN XingkaiZHANG Maojun
(Pomology Research Institute,Jilin Academy of Agricultural Sciences/Scientific Observing and Experimental Station of Pomology (Jilin,Northeast Region),Ministry of Agriculture,Gongzhuling,Jilin 136100)
Keywords:
Pyrus ussuriensis MaximSSR markerreaction systemprimer screening
PACS:
-
DOI:
10.11937/bfyy.201523029
Abstract:
Genomic DNA of young leaves of Pyrus ussuriensis Maxim was tested as the template,optimization experiments on some important parameters affecting SSR-PCR amplification were conducted to establish an optimum system suitable for SSR-PCR Pyrus ussuriensis Maxim.Orthogonal design was used to optimize SSR anplification system with five factors (including DNA template,Mg2+,Taq polymerase,dNTPs and primer) at five levels,respectively.The results showed that,a suitable SSR-PCR reaction system was established,its total volume was 20 μL,containing 10 ng DNA template,2.5 μL Mg2+(20 mmol/L),1.25 U Taq polymerase,1.0 μL dNTPs (10 mmol/L),1.5 μL primer (10 μmol/L) and 2 μL 10×PCR buffer.The reaction system was successfully applied in primer screening experiment and the amplification of the lines from Pyrus ussuriensis MaximבKosui’ using primer CHg04b,and indicated the suitability and stability of the system.

References:

 

[1]MOORE S SSARGEANT L LKING T Jet al.The conservation of dinucleotide microsatellites among mammalian genomes allows the use of heterologous PCR primer pairs in closely related species[J].Genomics199110(3)654-660.

[2]蒋彩虹,王元英,孙玉合,.SSRISSR标记技术应用进展[J].中国烟草科学,200728(2):1-5.

[3]朱英,陶刚,刘作易,.SSR分子标记的发展及其在动植物遗传育种中的应用[J].贵州农业科学,2006,34(增刊)93-95.

[4]刘峰,东方阳,邹继军,.应用微卫星标记进行大豆种质多样性和遗传分析[J].遗传学报,2000,27(7)628-633.

[5]郭瑞星,刘小红,荣廷昭,.植物SSR标记的发展及其在遗传育种中的应用[J].玉米科学,2005,13(2):8-11.

[6]ZHEBENTYAYEVA T NREIGHARD G LGORINA V Met al.Simple sequence repeat (SSR) analysis for assessment of genetic variability in apricot germplasm[J].Theor Appl Genet2003106425-444.

[7]曹玉芬.梨栽培品种SSR标记遗传多样性研究[D].北京:中国农业科学院,2006.

[8]许靖诗,乌云塔娜,叶生晶,.梨种质资源SSR引物的筛选与评价[J].中南林业科技大学学报,2012(7):80-85.

[9]高源,田路明,刘凤之,.利用SSR荧光标记构建92个梨品种指纹图谱[J].园艺学报,2012(8):1437-1446.

[10]张东,舒群,滕元文,.中国红皮砂梨品种的SSR标记分析[J].园艺学报,2007(1):47-52.

[11]田义轲,王彩虹,贾彦利,.梨矮化基因pcDwSSR标记定位[J].果树学报,2008,25(3):404-407.

[12]毕红园.山西梨属主要栽培品种EST-SSR指纹图谱的构建[D].太原:山西大学,2013.

[13]张琪静,张新忠,李贺,等.甜樱桃SSR体系的建立,优化及应用[J].果树学报,200724(6)770-773.

[14]徐兴兴.苹果SSR反应体系的建立及品种资源遗传多样性分析[D].保定:河北农业大学,2006.

[15]孙文英,张玉星,陈世昌,等. SSR反应体系的优化[J].河南农业科学,2010(8)101-105.

[16]毕红园,王长彪,段永红,等.采用正交设计法优化梨SSR-PCR体系[J].生物技术通报,20131(5)111-115.

Memo

Memo:
-
Last Update: 2016-01-15