|Table of Contents|

Bioinformatics Analysis of VvWRKY13 Transcription Factor in Vitis vinifera L.(PDF)

《北方园艺》[ISSN:1001-0009/CN:23-1247/S]

Issue:
2013年13期
Page:
117-120
Research Field:
Publishing date:

Info

Title:
Bioinformatics Analysis of VvWRKY13 Transcription Factor in Vitis vinifera L.
Author(s):
HOU Li-xia; WANG Wen-jie; LIU Xin
Key Lab of Plant Biotechnology in Universities of Shandong Province，College of Life Science，Qingdao Agricultural University，Qingdao，Shandong 266109
Keywords:
Vitis vinifera L.; VvWRKY13; transcription factor; bioinformatic
PACS:
Q 946.1；S 663.1
DOI:
-
Abstract:
The characteristic of VvWRKY13 transcription factor in grape was analyzed and predicted by bioinformatic methods in the following aspects：physical and chemical characters，conserved domain，hydrophobicity or hydrophilicity，signal peptide，transmembrance structure，phosphorylation in amino acid，secondary and tertiary structure of protein，subcellular localization and molecular phylogenetic evolution.The results showed that VvWRKY13 had molecular weight 25 718.1 Da，isoelectric point 9.08 and instability coefficient 60.87；it possessed one conserved WRKY domain，so it was Ⅱ type WRKY transcription factor；VvWRKY was a hydrophilicity protein without a signal peptide and transmembrance structure；random coil and αhelix were the major structural elements of polypeptide chain；subcellular localization result indicated that VvWRKY13 was located in nucleus very likely.This research would be of great information and values for its function study.

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Last Update: 2014-08-08